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For any given query protein, this program: (1) infers secondary structure features (e.g., coils, beta strands, alpha helices); (2) infers TMSs; (3) displays the position key residues (e.g., cytoplasmatic basic, non-cytoplasmathic N-glycosylation sequon, flanking amhipathic); and (4) plots the cartoon TMS topology of the protein indicating the orientation of the TMSs and loops relative to the membrane. This program was developed in the group of Dr. Milton Saier. |
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Contact | Questions and comments can be sent to: Kevin Hendargo <khendarg at-sign ucsd dot edu> |