Biotools>TMS Split


input
Settings:
(?) Define the criteria that will be used to cut the query sequence.
 CUT Residue Range:
(?) Extract a specific range of aminoacids from a sequence.

       Cut from Residue   to


EQUAL Cut:
(?) Cut protein into segments of equal length.

       Cut into   equal parts


SPLIT Groups of TMSs:
(?) Cut protein into groups containing a predined number of TMSs.

       TMS per group:
(?) The number of TMSs in each group.
   Tail size:
(?) The number of extra residues to add (if possible) to both ends of each TMS group.


       Group overlap:   Overlapping:
(?) TMSs in groups will overlap (e.g., [1,2,3], [2,3,4], etc.)
    Non-Overlapping:
(?) TMSs in groups will not overlap (e.g., [1,2,3], [4,5,6], etc.)


       Action for the remaining TMSs in non-overlapping groups:
         Ignore:
(?) Ignore TMSs that do not fit in the specified grouping.
    Add to last group:
(?) Add the remaining TMSs to the last group.

         Add to a new Group:
(?) Create a new group with the remaining TMSs.



CUT TMS Range
(?) Extract a sequence segment with the specified range of TMSs.

       Cut from TMS   to     Tail size:
(?) The number of extra residues to add (if possible) to each end of the resulting sequence.
Query sequence(s):
(?) Query protein sequence(s) that will be cut.
 Please enter your sequence(s) in FASTA format:

... or upload a file:
(?) Upload a file with your sequence(s) in FASTA format.